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        "| link:https://src.fedoraproject.org/rpms/arbor[Arbor]\n| `sudo dnf install arbor-{,mpich,openmpi}`\n| The Arbor multi-compartment neural network simulation library.\n\n| link:https://src.fedoraproject.org/rpms/auryn[Auryn]\n| `sudo dnf install auryn-{mpich,openmpi}`\n| A simulator for spiking neural networks with plastic synapses. Only built with xref:mpi.adoc[MPI support].\n\n| link:https://src.fedoraproject.org/rpms/bionetgen[bionetgen]\n| `sudo dnf install bionetgen`\n| Software for rule-based modeling of biochemical systems.\n\n| link:https://copr.fedorainfracloud.org/coprs/g/neurofedora/neurofedora-extra/package/python-brian/[Brian (v1)]\n| Please see xref:copr.adoc[COPR].\n| A clock-driven simulator for spiking neural networks.\n\n| link:https://src.fedoraproject.org/rpms/python-brian2[Brian2]\n| `sudo dnf install python3-brian2`\n| A clock-driven simulator for spiking neural networks.\n\n| link:https://src.fedoraproject.org/rpms/calcium-calculator[CalC: Calcium calculator]\n| `sudo dnf install calcium-calculator`\n| A modeling tool for simulating intracellular calcium diffusion and buffering.\n\n| link:https://src.fedoraproject.org/rpms/COPASI[COPASI]\n| `sudo dnf install COPASI`\n| A software application for simulation and analysis of biochemical networks and their dynamics.\n\n| link:https://src.fedoraproject.org/rpms/genesis-simulator[Genesis]\n| `sudo dnf install genesis-simulator`\n| The GEneral NEural Simulation System.\n\n| link:https://src.fedoraproject.org/rpms/jlems[jLEMS]\n| `sudo dnf install jlems`\n| Java interpreter for the Low Entropy Model Specification (LEMS) language.\n\n| link:https://src.fedoraproject.org/rpms/mod2c[mod2c]\n| `sudo dnf install mod2c`\n| NMODL to C adapted for CoreNEURON simulator.\n\n| link:https://src.fedoraproject.org/rpms/moose[Moose]\n| `sudo dnf install moose`\n| Multiscale Neuroscience and Systems Biology Simulator.\n\n| link:https://src.fedoraproject.org/rpms/MUSIC[MUSIC]\n| `sudo dnf install MUSIC`\n| MUSIC, the MUltiSimulation Coordinator.\n\n| link:https://src.fedoraproject.org/rpms/python-neatdend[NEAT]\n| `sudo dnf install python3-neatdend`\n| A python library for the study, simulation and simplification of morphological neuron models.\n\n| link:https://src.fedoraproject.org/rpms/nest[NEST]\n| `sudo dnf install python3-nest nest`\n| The neural simulation tool. Built with MPI support. Please see link:https://src.fedoraproject.org/rpms/nest[this page] for details on installation.\n\n| link:https://src.fedoraproject.org/rpms/python-netpyne[NetPyNE]\n| `sudo dnf install python3-netpyne`\n| A Python package to facilitate the development, parallel simulation, optimization and analysis of multiscale biological neuronal networks in NEURON.\n\n| link:https://src.fedoraproject.org/rpms/neuron[NEURON]\n| `sudo dnf install python3-neuron neuron neuron-devel`\n| A flexible and powerful simulator of neurons and networks. Currently not built with xref:mpi.adoc[MPI support]. `/usr/bin/oc` has been renamed to `/usr/bin/hoc` (link:https://bugzilla.redhat.com/show_bug.cgi?id=1696118[rhbz 1696118]).\n\n| link:https://src.fedoraproject.org/rpms/neurord[neurord]\n| `sudo dnf install neurord`\n| Stochastic reaction-diffusion simulator.\n\n| link:https://src.fedoraproject.org/rpms/python-neurotune[neurotune]\n| `sudo dnf install python3-neurotune`\n| A package for optimizing electical models of excitable cells.\n\n| link:https://src.fedoraproject.org/rpms/python-niapy[NiaPy]\n| `sudo dnf install python3-niapy`\n| Python microframework for building nature-inspired algorithms.\n\n| link:https://src.fedoraproject.org/rpms/python-PyLEMS[PyLEMS]\n| `sudo dnf install python3-PyLEMS`\n| Python interpreter for the Low Entropy Model Specification (LEMS) language.\n\n| link:https://src.fedoraproject.org/rpms/python-pynn[PyNN]\n| `sudo dnf install python3-pynn`\n| Simulator-independent specification of neuronal network models.\n\n| link:https://src.fedoraproject.org/rpms/libsonata[libsonata]\n| `sudo dnf install python3-libsonata libsonata`\n| Python and C++ interface to the SONATA format.\n\n| link:https://src.fedoraproject.org/rpms/python-lfpy[LFPy]\n| `sudo dnf install python3-lfpy`\n| Module for extra cellular potentials of multicompartment neuron models on NEURON.\n\n| link:https://src.fedoraproject.org/rpms/python-lfpykit[LFPykit]\n| `sudo dnf install python3-lfpykit`\n| Freestanding implementations of electrostatic forward models incorporated in LFPy.\n\n| link:https://src.fedoraproject.org/rpms/python-ratinabox[RatInABox]\n| `sudo dnf install python3-ratinabox`\n| A package for modelling locomotion in complex environments and spatially/velocity selective cell activity.\n\n| link:https://src.fedoraproject.org/rpms/python-sciunit[SciUnit]\n| `sudo dnf install python3-sciunit`\n| A Test-Driven Framework for Formally Validating Scientific Models Against Data.\n\n| link:https://src.fedoraproject.org/rpms/python-steps[STEPS]\n| `sudo dnf install python3-steps{,-mpich,-openmpi}`\n| STochastic Engine for Pathway Simulation.\n\n| link:https://src.fedoraproject.org/rpms/smoldyn[smoldyn]\n| `sudo dnf install smoldyn`\n| A particle-based spatial stochastic simulator.\n\n"
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